Relations are supported by facts extracted from the literature using MedScan, a Natural Language Processing (NLP) tool developed by Ariadne....

You can add a protein to a functional class directly in the public space using an account with ‘Editor’ role and via the webclient (This functionality is...

You can add proteins to an existing functional class or a newly created functional class by doing the following:

1. Open a new pathway and add to the...

In ResNet 7 database, miRNA belongs to the protein entity category. By default, the miRNA shape is an ellipse, the generic protein shape in ResNet. To...

You can remove a protein from a functional class located in the public space using an account with ‘Editor’ role and via the webclient (This functionality...

Double-click on the functional class entity to open the Properties dialog.

Select the Members tab to see the list of proteins mapped to the functional...

Usually the number of references which are associated with this relationship gives an indication of the accuracy of the relationship. 

As a rough guide,...

Select the “Add” button located within the bottom menu bar in the pathway pane, and from the drop-down menu, select “Entity”.

In the Add New Protein window...

Select the file for export and select Export. A menu box appears with 3 export options.  The first two options export the file as a *.gpp file that can...

Follow these steps to find the intersection between two lists of groups: 

1.  Open both list of groups in the list pane (ex. the results of a GSEA...

In the database pane, select Import.  From the drop-down menu select “Gene List”. The following dialog box appears (Figure 1). 

Identifies such...

This is a two-steps process. You have first to publish the pathway in the public space. Then a manager of the database has to accept your published pathway....

Currently this is done at 3 monthly intervals. You can download each quarterly ResNet update from the Ariadne website:  www.ariadnegenomics.com.  Log...

Gene Ontology and Entrez Gene IDs are updated when major ResNet updates are released.  Currently that is approximately once a year.

The ResNet Plant database is updated twice a year.

For more information about ResNet Plant visit the download center of the support section.

1.    Am J Respir Cell Mol Biol2.    Am J Transplantation3.    ATVB 4.    Biology of...

1.  Annals of Botany2.  Crop Science3.  Journal of Experimental Botany4.  New Phytologist5.  Plant Cell6.  Plant, Cell and...

Ariadne has prepared an organization of genes for use in interpretation of experimental data, simplification of pathway diagrams, and summarization of analysis...

Gene Ontology is a controlled vocabulary (ontology) that describe gene products in terms of their associated:

biological processes;cellular...

The cellular process categories and associated aliases come directly from the Gene Ontology without further annotation or curation by Ariadne.