ResNet Plant Database

ResNet Plant is a pathway and molecular interaction database for plant researchers to be used with Pathway Studio pathway analysis software. It includes information on:

  • Relations to Arabidopsis proteins, (and rice genes that are mapped to Arabidopsis), Protein annotation for eight other plant species;
  • Over 90,000 functional relationships and molecular interactions extracted from 117,000 plant-specific abstracts and 8 plant-specific full-text journals.

The ResNet Plant database is easily updated via MedScan Technology (comes with the package)

ResNet Plant belongs to ResNet Family of Databases. An evaluation of ResNet Plant with Pathway Studio is available.

"I think it is very good, probably the best in the market at this point since it can be frequently updated"

Magnolia Ariza-Nieto Ph.D.,
US Plant, Soil and Nutrition Lab, CORNELL University.

ResNet Plant Features

  • All extracted relationships keep all references to their literature sources
  • Synonyms and homologs are included to maintain identity and reduce redundancy
  • Extensive aliasing ensures all relevant information is extracted
  • You can make changes to the database, add or remove entities and relationships, as well as update the ResNet Plant as often as every day with MedScan module of Pathway Studio
  • Regular updates provided by Ariadne will not interfere with changes and additions you have made to the database.

ResNet Plant Statistics

  • Over 90,000 relationships for:
    • 71,501 proteins
    • 3,831 small molecules
    • 915 cellular processes
    • 97 plant diseases
  • Pathways:
    • 17 Plant Signaling Pathways
    • 315 AraCyc pathways
  • Annotations:
    • Entrez Gene protein annotations
    • Protein annotations (aliases, GO annotation, protein cell localization, and database references) from Dana-Farber Cancer Institute and Harvard School of Public Health
    • Small Molecule attributes (aliases, PubChem Identifiers, and CAS registry numbers)
    • MedScan dictionary annotations for cell processes and diseases

LIST OF JOURNALS

Annals of Botany
Crop Science
Journal of Experimental Botany
New Phytologist
Plant Cell
Plant, Cell and Environment
Plant Journal
Plant Physiology

How to Purchase

An evaluation of ResNet Plant is available upon Registration.

To purchase the ResNet Plant database with Pathway Studio software, for more information, or to schedule a web demonstration, contact our sales department at (240) 453-6272, or (866) 340-5040 (toll free).

You can also fill-in the Contact Us form, and our sales representative will contact you.