Protein : HDAC5

Owner Public
URN urn:agi-llid:10014
Hugo ID 14068
Connectivity 152
Name HDAC5
Description histone deacetylase 5
Notes Histones play a critical role in transcriptional regulation, cell cycle progression, and developmental events. Histone acetylation/deacetylation alters chromosome structure and affects transcription factor access to DNA. The protein encoded by this gene belongs to the class II histone deacetylase/acuc/apha family. It possesses histone deacetylase activity and represses transcription when tethered to a promoter. It coimmunoprecipitates only with HDAC3 family member and might form multicomplex proteins. It also interacts with myocyte enhancer factor-2 (MEF2) proteins, resulting in repression of MEF2-dependent genes. This gene is thought to be associated with colon cancer. Two transcript variants encoding different isoforms have been found for this gene.

MGI ID 1333784

Cell Localization Nucleus

Pathway Control of skeletal myogenesis

Group Deacetylases
B cell differentiation
regulation of progression through cell cycle
chromatin modification
chromatin silencing
chromatin remodeling
transcription
negative regulation of transcription, DNA-dependent
negative regulation of transcription from RNA polymerase II promoter
regulation of transcription, DNA-dependent
heart development
negative regulation of striated muscle development
inflammatory response
cytoplasm
nucleus
nuclear body
histone deacetylase complex
protein binding
transcription factor binding
transcription corepressor activity
hydrolase activity
histone deacetylase activity
transcriptional repressor activity
specific transcriptional repressor activity

GenBank ID NC_000017
NM_001015053
NP_001015053
NM_005474
NP_005465
NT_010783
NW_926839
AC_000060
AC023855
BK000028
DAA00017
AB011172
BAA25526
AB177853
BAD66831
AF039691
AAC18040
AF132608
AAD29047
AK027734
BAB55329
BC013140
AAH13140
BC038423
BC051824
AAH51824
BM564861
BM998071
CN290533
Q5W9G6
Q96K29
Q9UQL6
NC_000077
NM_010412
NP_034542
NT_165773
NW_000040
NW_001030434
AC_000033
AL954730
AF006602
AAD09834
AF207748
AAF31418
AK122325
BAC65607
AK139202
AK145972
AK146483
BAE27204
AK155335
BAE33201
AK156008
AK157159
AK161956
BAE36653
AK182309
AK182416
AK191268
AK191734
AK191790
AK193973
AK194720
AK197372
AK198049
AK198950
AK200052
AK200348
AK213216
AK215682
AK216114
AK216995
AK219061
AK220038
BC023309
BC049926
BC058554
BC060609
AAH60609
Q9Z2V6

Source Curated

LocusLink ID 10014
15184

Organism Homo sapiens
Mus musculus

OMIM ID 605315

Alias HD5
NY-CO-9
histone deacetylase 5
antigen NY-CO-9
Hdac4
mHDA1
AI426555
mKIAA0600
histone deacetylase 4

GO ID 0004407
0016787
0016566
0008134
0030183
0006338
0006342
0006954
0045843
0000074
0006355
0006350
0005737
0000118
0005634
0005515
0003714
0016564
0016568
0007507
0000122
0045892
0016604

Swiss-Prot Accession Q5W9G6
Q96K29
Q9UQL6
Q9Z2V6

Unigene ID Hs.438782
Mm.22665